helix package¶
Subpackages¶
- helix.components package
- Subpackages
- Submodules
- helix.components.configuration module
- helix.components.experiments module
- helix.components.logs module
- helix.components.plot_editor module
- helix.components.plots module
- helix.components.preprocessing module
- helix.components.statistical_tests module
- Module contents
- helix.options package
- Subpackages
- Submodules
- helix.options.data module
- helix.options.enums module
ActivationFunctionsDataAnalysisStateKeysDataAnalysisStateKeys.CorrelationHeatmapDataAnalysisStateKeys.DescriptorCorrelationDataAnalysisStateKeys.DescriptorPairPlotDataAnalysisStateKeys.ExcludeCornerDataAnalysisStateKeys.NBinsDataAnalysisStateKeys.PairPlotDataAnalysisStateKeys.PairPlotCorrelationTypeDataAnalysisStateKeys.PairPlotDiagonalTypeDataAnalysisStateKeys.PerplexityDataAnalysisStateKeys.SaveHeatmapDataAnalysisStateKeys.SavePairPlotDataAnalysisStateKeys.SaveTSNEPlotDataAnalysisStateKeys.SaveTargetVarDistributionDataAnalysisStateKeys.SelectAllDescriptorsCorrelationDataAnalysisStateKeys.SelectAllDescriptorsPairPlotDataAnalysisStateKeys.SelectNormTsneDataAnalysisStateKeys.ShowKDEDataAnalysisStateKeys.TSNEPlotDataAnalysisStateKeys.TargetVarDistribution
DataPreprocessingStateKeysDataPreprocessingStateKeys.CorrelationThresholdDataPreprocessingStateKeys.DependentNormalisationDataPreprocessingStateKeys.IndependentNormalisationDataPreprocessingStateKeys.LassoFeatureSelectionDataPreprocessingStateKeys.ProceedTransformationDataPreprocessingStateKeys.RegularisationTermDataPreprocessingStateKeys.ThresholdCorrelationDataPreprocessingStateKeys.ThresholdVarianceDataPreprocessingStateKeys.VarianceThreshold
DataSplitMethodsExecutionStateKeysExecutionStateKeys.DataSplitExecutionStateKeys.DependentVariableNameExecutionStateKeys.ExperimentNameExecutionStateKeys.NormalisationExecutionStateKeys.NumberOfBootstrapsExecutionStateKeys.ProblemTypeExecutionStateKeys.RandomSeedExecutionStateKeys.UploadedFileNameExecutionStateKeys.UseHyperParamSearch
FeatureImportanceStateKeysFeatureImportanceStateKeys.EnsembleMethodsFeatureImportanceStateKeys.ExplainAllModelsFeatureImportanceStateKeys.ExplainModelsFeatureImportanceStateKeys.FILogBoxFeatureImportanceStateKeys.GlobalFeatureImportanceMethodsFeatureImportanceStateKeys.LocalImportanceFeaturesFeatureImportanceStateKeys.NumberOfImportantFeaturesFeatureImportanceStateKeys.NumberOfRepetitionsFeatureImportanceStateKeys.SaveFeatureImportanceOptionsFeatureImportanceStateKeys.SaveFeatureImportanceResultsFeatureImportanceStateKeys.ScoringFunction
FeatureImportanceTypesFuzzyStateKeysMachineLearningStateKeysMetricsModelNamesNormalisationsOptimiserTypesPlotOptionKeysPlotOptionKeys.AxisFontSizePlotOptionKeys.AxisTickSizePlotOptionKeys.ColorByPlotOptionKeys.ColourMapPlotOptionKeys.ColourSchemePlotOptionKeys.DPIPlotOptionKeys.FontFamilyPlotOptionKeys.HeightPlotOptionKeys.PlotColourPlotOptionKeys.PlotTitlePlotOptionKeys.PointColourPlotOptionKeys.PointSizePlotOptionKeys.RotateXAxisLabelsPlotOptionKeys.RotateYAxisLabelsPlotOptionKeys.SavePlotsPlotOptionKeys.SelectedFoldsPlotOptionKeys.SelectedModelsPlotOptionKeys.SelectedSetsPlotOptionKeys.ShowCustomPlotCreatorPlotOptionKeys.StyleByPlotOptionKeys.TitleFontSizePlotOptionKeys.WidthPlotOptionKeys.XAxisLabelPlotOptionKeys.YAxisLabel
PlotTypesProblemTypesSvmKernelsTransformationsYViewExperimentKeys
- helix.options.execution module
- helix.options.fi module
FeatureImportanceOptionsFeatureImportanceOptions.feature_importance_ensembleFeatureImportanceOptions.fi_log_dirFeatureImportanceOptions.global_importance_methodsFeatureImportanceOptions.local_importance_methodsFeatureImportanceOptions.num_features_to_plotFeatureImportanceOptions.permutation_importance_repeatFeatureImportanceOptions.permutation_importance_scoringFeatureImportanceOptions.save_feature_importance_optionsFeatureImportanceOptions.save_feature_importance_plotsFeatureImportanceOptions.save_feature_importance_results
- helix.options.file_paths module
data_analysis_plots_dir()data_options_path()data_preprocessing_options_path()execution_options_path()fi_options_dir()fi_options_path()fi_plot_dir()fi_result_dir()fuzzy_options_path()fuzzy_plot_dir()fuzzy_result_dir()helix_experiments_base_dir()log_dir()ml_metrics_full_path()ml_metrics_mean_std_path()ml_model_dir()ml_options_path()ml_plot_dir()ml_predictions_path()plot_options_path()preprocessed_data_path()uploaded_file_path()
- helix.options.fuzzy module
- helix.options.ml module
- helix.options.plotting module
PlottingOptionsPlottingOptions.angle_rotate_xaxis_labelsPlottingOptions.angle_rotate_yaxis_labelsPlottingOptions.dpiPlottingOptions.heightPlottingOptions.plot_axis_font_sizePlottingOptions.plot_axis_tick_sizePlottingOptions.plot_colourPlottingOptions.plot_colour_mapPlottingOptions.plot_colour_schemePlottingOptions.plot_font_familyPlottingOptions.plot_titlePlottingOptions.plot_title_font_sizePlottingOptions.save_plotsPlottingOptions.widthPlottingOptions.xaxis_labelPlottingOptions.yaxis_label
- helix.options.preprocessing module
PreprocessingOptionsPreprocessingOptions.correlation_thresholdPreprocessingOptions.data_is_preprocessedPreprocessingOptions.dependent_variable_transformationPreprocessingOptions.feature_selection_methodsPreprocessingOptions.independent_variable_normalisationPreprocessingOptions.lasso_regularisation_termPreprocessingOptions.variance_threshold
- helix.options.search_grids module
- Module contents
- helix.pages package
- helix.services package
- Subpackages
- Submodules
- helix.services.configuration module
- helix.services.data module
- helix.services.experiments module
- helix.services.logs module
- helix.services.metrics module
- helix.services.ml_models module
- helix.services.plotting module
create_pairplot()create_tsne_plot()plot_auc_roc()plot_bar_chart()plot_beta_coefficients()plot_confusion_matrix()plot_correlation_heatmap()plot_global_shap_importance()plot_lime_importance()plot_local_shap_importance()plot_permutation_importance()plot_scatter()plot_target_variable_distribution()
- helix.services.preprocessing module
- helix.services.statistical_tests module
- helix.services.weights_init module
- Module contents
Submodules¶
helix.Home module¶
helix.launch module¶
- helix.launch.main()¶
The entrypoint of Helix. This method shouldn’t be called explicitly. Use the helix command in the terminal after installing the app.